BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F01LP1|AL425888
(825 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1264 1635 0.0
>3x_Contig1264
Length = 6524
Score = 1635 bits (825), Expect = 0.0
Identities = 825/825 (100%)
Strand = Plus / Minus
Query: 1 catcagtttccaaaaatctcgtcttgatgacttcacttatggtaaagagaaagatttgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6092 catcagtttccaaaaatctcgtcttgatgacttcacttatggtaaagagaaagatttgag 6033
Query: 61 tcagatctcagagccaagcttggttatgaaacgtgccgatttcaagatcttacaaataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6032 tcagatctcagagccaagcttggttatgaaacgtgccgatttcaagatcttacaaataag 5973
Query: 121 tgatttacattttggcagacatatcgtctcagactccagaaaagagaaaccagactcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5972 tgatttacattttggcagacatatcgtctcagactccagaaaagagaaaccagactcaat 5913
Query: 181 ttttaggtacgattggcctaatgtccaatttattcattccgttattagaaacgaaagacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5912 ttttaggtacgattggcctaatgtccaatttattcattccgttattagaaacgaaagacc 5853
Query: 241 cgatttagctgtcattacaggccatatctttaaagatttcaacaaaaatttagactatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5852 cgatttagctgtcattacaggccatatctttaaagatttcaacaaaaatttagactatga 5793
Query: 301 aagtcaaatattaaagatggtatctcccattatcagcaatgggattccatttcttttcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5792 aagtcaaatattaaagatggtatctcccattatcagcaatgggattccatttcttttcac 5733
Query: 361 ttggggtgaaccccaagtaacaaccgagtttaaggttaacattttaaacttcatcaaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5732 ttggggtgaaccccaagtaacaaccgagtttaaggttaacattttaaacttcatcaaatc 5673
Query: 421 tttaccattttgtttgaataaatttgacctcaaaaattcaacttatttgatgctcccact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5672 tttaccattttgtttgaataaatttgacctcaaaaattcaacttatttgatgctcccact 5613
Query: 481 gctactaccagctaagacacctggcagtcaaaaacaaattggtactatatttgcattcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5612 gctactaccagctaagacacctggcagtcaaaaacaaattggtactatatttgcattcga 5553
Query: 541 ttcaaatgtaacagaatcgtacaacttcttagataaatttccacgatcaccacaatcggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5552 ttcaaatgtaacagaatcgtacaacttcttagataaatttccacgatcaccacaatcggt 5493
Query: 601 ttacaatctagcatttcagcacttaccgctccatgaatatcgcccacagggttcatttgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5492 ttacaatctagcatttcagcacttaccgctccatgaatatcgcccacagggttcatttgc 5433
Query: 661 actaattggaaattacgaacagaaaggctcacttgattatatacctcacactaaagcatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5432 actaattggaaattacgaacagaaaggctcacttgattatatacctcacactaaagcatt 5373
Query: 721 cagaaatcttttaggggaaaaggacatcaaggctatttcctgcggtcatgaacatggcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5372 cagaaatcttttaggggaaaaggacatcaaggctatttcctgcggtcatgaacatggcaa 5313
Query: 781 cgattgttgcgttctctcagatgggaaacagcaaaatctcaagaa 825
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5312 cgattgttgcgttctctcagatgggaaacagcaaaatctcaagaa 5268
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7105
Number of Sequences: 1807
Number of extensions: 7105
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 825
length of database: 10,358,551
effective HSP length: 16
effective length of query: 809
effective length of database: 10,329,639
effective search space: 8356677951
effective search space used: 8356677951
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)